
Journal of Shanghai Jiao Tong University (Medical Science) ›› 2024, Vol. 44 ›› Issue (9): 1094-1103.doi: 10.3969/j.issn.1674-8115.2024.09.004
• Basic research • Previous Articles Next Articles
LIANG Mengchen(
), LI Jiaqi(
), WU Xinyi, MO Xiaohui, JU Qiang(
)
Received:2024-05-03
Accepted:2024-07-18
Online:2024-09-28
Published:2024-09-28
Contact:
JU Qiang
E-mail:2894791478@qq.com;jqedison@163.com;qiangju401@sina.com
Supported by:CLC Number:
LIANG Mengchen, LI Jiaqi, WU Xinyi, MO Xiaohui, JU Qiang. Analysis of hair follicle microbiota in non-lesional areas of patients with moderate-to-severe acne vulgaris: a single-center cross-sectional study[J]. Journal of Shanghai Jiao Tong University (Medical Science), 2024, 44(9): 1094-1103.
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URL: https://xuebao.shsmu.edu.cn/EN/10.3969/j.issn.1674-8115.2024.09.004
| Primer name | Primer sequence (5′→3′) | Amplified region |
|---|---|---|
| 341F | CCTACGGGNGGCWGCAG | V3‒4[ |
| 805R | GACTACHVGGGTATCTAATCC |
Tab 1 Primer sequences
| Primer name | Primer sequence (5′→3′) | Amplified region |
|---|---|---|
| 341F | CCTACGGGNGGCWGCAG | V3‒4[ |
| 805R | GACTACHVGGGTATCTAATCC |
| Step | Program |
|---|---|
| Step 1 | 95 ℃ 30 s |
| Step 2 (40 cycles) | 95 ℃ 5 s; 55 ℃ 30 s; 72 ℃ 30 s |
| Step 3 (dissociation stage) | 94 ℃ 30 s; 70 ℃ 1.5 min; 94 ℃ 10 s |
Tab 2 qPCR absolute quantification program
| Step | Program |
|---|---|
| Step 1 | 95 ℃ 30 s |
| Step 2 (40 cycles) | 95 ℃ 5 s; 55 ℃ 30 s; 72 ℃ 30 s |
| Step 3 (dissociation stage) | 94 ℃ 30 s; 70 ℃ 1.5 min; 94 ℃ 10 s |
| Characteristic | C group (n=11) | M group (n=10) | S group (n=11) | H/χ² value | P value |
|---|---|---|---|---|---|
| Gender/n(%) | 0.182 | 0.913 | |||
| Male | 5 (45.5) | 5 (50.0) | 6 (54.5) | ||
| Female | 6 (54.5) | 5 (50.0) | 5 (45.5) | ||
| Age/year | 24.64±1.63 | 21.90±2.88 | 23.18±5.42 | 3.827 | 0.252 |
| Ethnic group/n(%) | 1.971 | 0.373 | |||
| Han | 10 (90.9) | 10 (100.0) | 11 (100.0) | ||
| Bai | 1 (9.1) | 0 (0) | 0 (0) | ||
| Education/n(%) | 2.676 | 0.262 | |||
| Senior high school/technical secondary school | 4 (36.4) | 2 (20.0) | 6 (54.5) | ||
| Junior college and above | 7 (63.6) | 8 (80.0) | 5 (45.5) | ||
| Work/n(%) | 1.703 | 0.427 | |||
| In service | 3 (27.3) | 2 (20.0) | 5 (45.5) | ||
| Not in service | 8 (72.7) | 8 (80.0) | 6 (54.5) | ||
| Habitual residence/n(%) | 2.147 | 0.342 | |||
| Shanghai | 11 (100.0) | 9 (90.0) | 9 (81.8) | ||
| Others | 0 (0) | 1 (10.0) | 2 (18.2) |
Tab 3 General characteristics of the three groups
| Characteristic | C group (n=11) | M group (n=10) | S group (n=11) | H/χ² value | P value |
|---|---|---|---|---|---|
| Gender/n(%) | 0.182 | 0.913 | |||
| Male | 5 (45.5) | 5 (50.0) | 6 (54.5) | ||
| Female | 6 (54.5) | 5 (50.0) | 5 (45.5) | ||
| Age/year | 24.64±1.63 | 21.90±2.88 | 23.18±5.42 | 3.827 | 0.252 |
| Ethnic group/n(%) | 1.971 | 0.373 | |||
| Han | 10 (90.9) | 10 (100.0) | 11 (100.0) | ||
| Bai | 1 (9.1) | 0 (0) | 0 (0) | ||
| Education/n(%) | 2.676 | 0.262 | |||
| Senior high school/technical secondary school | 4 (36.4) | 2 (20.0) | 6 (54.5) | ||
| Junior college and above | 7 (63.6) | 8 (80.0) | 5 (45.5) | ||
| Work/n(%) | 1.703 | 0.427 | |||
| In service | 3 (27.3) | 2 (20.0) | 5 (45.5) | ||
| Not in service | 8 (72.7) | 8 (80.0) | 6 (54.5) | ||
| Habitual residence/n(%) | 2.147 | 0.342 | |||
| Shanghai | 11 (100.0) | 9 (90.0) | 9 (81.8) | ||
| Others | 0 (0) | 1 (10.0) | 2 (18.2) |
| Phylum | Abundance/% | ||
|---|---|---|---|
| C group (n=11) | M group (n=10) | S group (n=11) | |
| Actinobacteria | 61.48±19.39 | 58.48±17.59 | 49.64±28.26 |
| Firmicutes | 21.94±16.10 | 35.42±18.37 | 43.90±26.42 |
| Proteobacteria | 14.84±15.23 | 5.27±5.79 | 5.51±5.41 |
| Bacteroidetes | 0.86±0.88 | 0.27±0.29 | 0.59±1.13 |
| Others | 0.88±0.55 | 0.56±0.57 | 0.36±0.49 |
Tab 4 Abundance of bacterial flora at the phylum level in three sample groups (%)
| Phylum | Abundance/% | ||
|---|---|---|---|
| C group (n=11) | M group (n=10) | S group (n=11) | |
| Actinobacteria | 61.48±19.39 | 58.48±17.59 | 49.64±28.26 |
| Firmicutes | 21.94±16.10 | 35.42±18.37 | 43.90±26.42 |
| Proteobacteria | 14.84±15.23 | 5.27±5.79 | 5.51±5.41 |
| Bacteroidetes | 0.86±0.88 | 0.27±0.29 | 0.59±1.13 |
| Others | 0.88±0.55 | 0.56±0.57 | 0.36±0.49 |
| Genus | Abundance/% | ||
|---|---|---|---|
C group (n=11) | M group (n=10) | S group (n=11) | |
| Staphylococcus | 13.05±11.54 | 31.54±17.84 | 37.30±27.09 |
| Propionibacterium | 36.99±17.67 | 25.94±19.63 | 23.78±16.30 |
| Unclassified Actinomycetales | 18.78±19.20 | 23.38±15.96 | 19.58±17.88 |
| Corynebacterium | 2.09±2.77 | 8.28±11.28 | 5.47±4.74 |
| Unclassified Neisseriaceae | 4.36±8.64 | 0.06±0.08 | 0.86±2.48 |
| Others | 24.73±22.90 | 10.80±9.32 | 13.01±22.05 |
Tab 5 Abundance of bacterial flora at the genus level in three sample groups (%)
| Genus | Abundance/% | ||
|---|---|---|---|
C group (n=11) | M group (n=10) | S group (n=11) | |
| Staphylococcus | 13.05±11.54 | 31.54±17.84 | 37.30±27.09 |
| Propionibacterium | 36.99±17.67 | 25.94±19.63 | 23.78±16.30 |
| Unclassified Actinomycetales | 18.78±19.20 | 23.38±15.96 | 19.58±17.88 |
| Corynebacterium | 2.09±2.77 | 8.28±11.28 | 5.47±4.74 |
| Unclassified Neisseriaceae | 4.36±8.64 | 0.06±0.08 | 0.86±2.48 |
| Others | 24.73±22.90 | 10.80±9.32 | 13.01±22.05 |
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