论著·基础研究

人胚胎干细胞多基因同时抑制系统的建立

  • 朱超南 ,
  • 陈沁雯 ,
  • 辛晨歌 ,
  • 李慧
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  • 上海交通大学基础医学院组织胚胎学与遗传发育学系,上海 200025
朱超南(1994—),女,硕士生;电子信箱: chaonan@sjtu.edu.cn。

网络出版日期: 2019-07-26

基金资助

上海市自然科学基金(19ZR1428300)

Inducible multiplexed CRISPR interference system in human embryonic stem cells

  • ZHU Chao-nan ,
  • CHEN Qin-wen ,
  • XIN Chen-ge ,
  • LI Hui
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  • Department of Histoembryology, Genetics & Development, Shanghai Jiao Tong University College of Basic Medical Sciences, Shanghai 200025, China

Online published: 2019-07-26

Supported by

Natural Science Foundation of Shanghai, 19ZR1428300

摘要

目的 ·在人胚胎干细胞 (human embryonic stem cells,hESCs) 中构建基于 CRISPR干扰系统的多基因同时抑制系统,作为研究家族基因功能和构建多基因疾病模型的工具。方法 ·通过 Golden Gate克隆法在 hESCs中建立受强力霉素 (doxycycline,Dox) 调控的多基因 CRISPR干扰系统。该系统主要由 2个质粒组成: 1个质粒在 Dox调控下融合表达核酸酶失活的 CRISPR相关蛋白 9(nucleasedeactivated CRISPR-associated protein 9,dCas9)和 Krüppel相关盒(Krüppel-associated box,KRAB)抑制结构域(dCas9-KRAB),另 1个质粒可同时表达 8个独立的导向 RNA(guide RNA,gRNA)来分别引导 dCas9-KRAB蛋白到基因组特定位点抑制转录起始或延伸。以基因组 DNA为模板进行 PCR,确定 2个质粒是否整合至细胞基因组,并通过 Western blotting确定细胞在 Dox诱导下是否可表达 dCas9-KRAB蛋白。结果 ·使用这种可调控的多基因 CRISPR干扰系统,可在 Dox诱导下在 hESCs中同时成功抑制多个基因的表达;并且这些基因的表达被抑制导致 hESCs形态改变,碱性磷酸酶活性下降,hESCs表面标志物阶段特异性胚胎表面抗原 4(stage-specific embryonic antigen 4,SSEA4)的表达下降, hESCs发生分化。结论 ·该 CRISPR干扰系统可以在 hESCs中高效地同时抑制多个基因的表达,是十分有效的多基因研究工具。

本文引用格式

朱超南 , 陈沁雯 , 辛晨歌 , 李慧 . 人胚胎干细胞多基因同时抑制系统的建立[J]. 上海交通大学学报(医学版), 2019 , 39(5) : 478 . DOI: 10.3969/j.issn.1674-8115.2019.05.007

Abstract

Objective · To generate a doxycycline (Dox)-inducible multiplexed CRISPR interference (CRISPRi) system for multiple gene inhibition in human embryonic stem cells (hESCs) to explore the function of gene families and model multigene diseases. Methods · A Dox-inducible multiplexed CRISPRi system was developedGolden Gate assembly in hESCs. This system consisted of two plasmids, one expressing modified repressive nucleasedeactivated CRISPR-associated protein 9 (dCas9) and Krüppel-associated box (KRAB) transcriptional repressor domain under the control of Dox, the other carrying eight independent guide RNA (gRNA) cassettes. PCR was conducted using total genomic DNA as a template to confirm whether these two plasmids were integrated into genome. Western blotting was performed to confirm whether the of dCas9-KRAB could be inducedDox treatment. Results · Using this tunable CRISPRi system, multiple genes were successfully silenced simultaneously in hESCs. The silence of genes and related to hESC self-renewal caused obvious cell differentiation in terms of changed cell morphology, decreased activity of alkaline phosphatase, and reduced of stage-specific embryonic antigen 4 (SSEA4), a marker of undifferentiated hESCs. Conclusion · This Dox-inducible multiplexed CRISPRi system can be used for quick and efficient silence of multiple genes in hESCs in a highly controlled manner.
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