JOURNAL OF SHANGHAI JIAOTONG UNIVERSITY (MEDICAL SCIENCE) ›› 2021, Vol. 41 ›› Issue (8): 1009-1016.doi: 10.3969/j.issn.1674-8115.2021.08.003
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Bing-qian ZHOU(), Li HAN, Zhe-yi CHEN, Shi-yu CHEN, Ying-xia ZHENG()
Online:
2021-08-28
Published:
2021-08-13
Contact:
Ying-xia ZHENG
E-mail:bettyerzhou@163.com;combi3230@163.com
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CLC Number:
Bing-qian ZHOU, Li HAN, Zhe-yi CHEN, Shi-yu CHEN, Ying-xia ZHENG. Expression of protein arginine methyltransferase 5 in lung cancer and its mechanism of promoting lung cancer[J]. JOURNAL OF SHANGHAI JIAOTONG UNIVERSITY (MEDICAL SCIENCE), 2021, 41(8): 1009-1016.
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URL: https://xuebao.shsmu.edu.cn/EN/10.3969/j.issn.1674-8115.2021.08.003
Intensity of PRMT5 expression | Proportion of PRMT5-positive cells | Score |
---|---|---|
Negative | 0 | 0 |
Weakly positive | 0‒25% | 1 |
Moderately positive | 25%‒50% | 2 |
Strongly positive | 50%‒75% | 3 |
No stronger intensity | 75%‒100% | 4 |
Tab 1 PRMT5 expression scoring criteria
Intensity of PRMT5 expression | Proportion of PRMT5-positive cells | Score |
---|---|---|
Negative | 0 | 0 |
Weakly positive | 0‒25% | 1 |
Moderately positive | 25%‒50% | 2 |
Strongly positive | 50%‒75% | 3 |
No stronger intensity | 75%‒100% | 4 |
shRNA | Sequence (5′→3′) |
---|---|
NC-shRNA | F: GATCTGTTCTCCGAACGTGTCACGTTTCAAGAGAACGTGACACGTTCGGAGAATTTTTTC |
R: AATTCAAAAAATTCTCCGAACGTGTCACGTTCTCTTGAAACGTGACACGTTCGGAGAACA | |
PRMT5-shRNA1 | F: GATCCGCCCAGTTTGAGATGCCTTATTTCAAGAGAATAAGGCATCTCAAACTGGGCTTTTTTG |
R: AATTCAAAAAAGCCCAGTTTGAGATGCCTTATTCTCTTGAAATAAGGCATCTCAAACTGGGCG | |
PRMT5-shRNA2 | F: GATCCGGCTGACCTCCCATCTAATCATTCAAGAGATGATTAGATGGGAGGTCAGCCTTTTTTG |
R: AATTCAAAAAAGGCTGACCTCCCATCTAATCATCTCTTGAATGATTAGATGGGAGGTCAGCCG | |
PRMT5-shRNA3 | F: GATCCCCCATCCTCTTCCCTATTAAGCTTCCTGTCAGACTTAATAGGGAAGAGGATGGGTTTTTG |
R: AATTCAAAAACCCATCCTCTTCCCTATTAAGTCTGACAGGAAGCTTAATAGGGAAGAGGATGGGG |
Tab 2 Oligonucleotide sequence of shRNA
shRNA | Sequence (5′→3′) |
---|---|
NC-shRNA | F: GATCTGTTCTCCGAACGTGTCACGTTTCAAGAGAACGTGACACGTTCGGAGAATTTTTTC |
R: AATTCAAAAAATTCTCCGAACGTGTCACGTTCTCTTGAAACGTGACACGTTCGGAGAACA | |
PRMT5-shRNA1 | F: GATCCGCCCAGTTTGAGATGCCTTATTTCAAGAGAATAAGGCATCTCAAACTGGGCTTTTTTG |
R: AATTCAAAAAAGCCCAGTTTGAGATGCCTTATTCTCTTGAAATAAGGCATCTCAAACTGGGCG | |
PRMT5-shRNA2 | F: GATCCGGCTGACCTCCCATCTAATCATTCAAGAGATGATTAGATGGGAGGTCAGCCTTTTTTG |
R: AATTCAAAAAAGGCTGACCTCCCATCTAATCATCTCTTGAATGATTAGATGGGAGGTCAGCCG | |
PRMT5-shRNA3 | F: GATCCCCCATCCTCTTCCCTATTAAGCTTCCTGTCAGACTTAATAGGGAAGAGGATGGGTTTTTG |
R: AATTCAAAAACCCATCCTCTTCCCTATTAAGTCTGACAGGAAGCTTAATAGGGAAGAGGATGGGG |
Primer | Forward (5’→3’) | Reverse (5’→3’) |
---|---|---|
PRMT5 | CGATCAGACCTACTGCTGTCA | CTCGGAGTTCCTGCGAATCT |
β-actin | CATGTACGTTGCTATCCAGGC | CTCCTTAATGTCACGCACGAT |
VIM | GACGCCATCAACACCGAGTT | CTTTGTCGTTGGTTAGCTGGT |
SNAI1 | TCGGAAGCCTAACTACAGCGA | AGATGAGCATTGGCAGCGAG |
CDH1 | ATTTTTCCCTCGACACCCGAT | TCCCAGGCGTAGACCAAGA |
Tab 3 Primer sequences for qPCR
Primer | Forward (5’→3’) | Reverse (5’→3’) |
---|---|---|
PRMT5 | CGATCAGACCTACTGCTGTCA | CTCGGAGTTCCTGCGAATCT |
β-actin | CATGTACGTTGCTATCCAGGC | CTCCTTAATGTCACGCACGAT |
VIM | GACGCCATCAACACCGAGTT | CTTTGTCGTTGGTTAGCTGGT |
SNAI1 | TCGGAAGCCTAACTACAGCGA | AGATGAGCATTGGCAGCGAG |
CDH1 | ATTTTTCCCTCGACACCCGAT | TCCCAGGCGTAGACCAAGA |
Clinical feature | Relative expression of PRMT5/score | t value | P value |
---|---|---|---|
Gender | 0.191 | 0.849 | |
Male (n=39) | 6.21±3.00 | ||
Female (n=34) | 6.08±2.84 | ||
Age | 0.490 | 0.626 | |
≥60 year (n=36) | 5.93±2.84 | ||
<60 year (n=37) | 6.32±2.99 | ||
TNM stage | 2.178 | 0.033 | |
Ⅰ‒Ⅱ (n=51) | 5.65±2.75 | ||
Ⅲ‒Ⅳ (n=22) | 7.24±3.01 | ||
Pathological grading | 0.370 | 0.712 | |
T1‒T2 (n=61) | 6.21±3.01 | ||
T3‒T4 (n=12) | 5.86±2.45 | ||
Lymph node metastasis metastasis | 0.884 | 0.379 | |
Yes (n=35) | 5.83±2.54 | ||
No (n=38) | 6.43±3.21 |
Tab 4 Relationship between the expression of PRMT5 and the clinical features of lung cancer patients
Clinical feature | Relative expression of PRMT5/score | t value | P value |
---|---|---|---|
Gender | 0.191 | 0.849 | |
Male (n=39) | 6.21±3.00 | ||
Female (n=34) | 6.08±2.84 | ||
Age | 0.490 | 0.626 | |
≥60 year (n=36) | 5.93±2.84 | ||
<60 year (n=37) | 6.32±2.99 | ||
TNM stage | 2.178 | 0.033 | |
Ⅰ‒Ⅱ (n=51) | 5.65±2.75 | ||
Ⅲ‒Ⅳ (n=22) | 7.24±3.01 | ||
Pathological grading | 0.370 | 0.712 | |
T1‒T2 (n=61) | 6.21±3.01 | ||
T3‒T4 (n=12) | 5.86±2.45 | ||
Lymph node metastasis metastasis | 0.884 | 0.379 | |
Yes (n=35) | 5.83±2.54 | ||
No (n=38) | 6.43±3.21 |
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